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921 FIPbio Odonata Checklist

Title
FIPbio Odonata Checklist
Time
2024-10-11 00:00:00
Description
This taxa checklist for the order "Odonata" was created to serve as part of the taxonomic backbone of the FIPbio Biodiversity Data Portal (fipbio.igb-berlin.de). Odonata taxa with genus, species and subspecies level were derived from the Catalogue of Life Checklist (version 2024-03-08) in GBIF (https://www.gbif.org/dataset/7ddf754f-d193-4cc9-b351-99906754a03b), specifically its "World Odonata List" (https://www.gbif.org/dataset/1873a64d-e5fe-498b-8881-1cab2c39e6f6) constiutent. This data was filtered using the "fipbiochecklist" R package (https://gitlab.igb-berlin.de/oder-so-project/sp2-data-portal/fipbiochecklists). which makes use of the "rgbif" R package functions to query taxon data via the GBIF API and is used to create standardized checklists following the BIMS template structure for upload to the FIPbio Biodiversity Modules' taxon management, References: Bánki, O., Roskov, Y., Döring, M., Ower, G., Hernández Robles, D. R., Plata Corredor, C. A., Stjernegaard Jeppesen, T., Örn, A., Vandepitte, L., Pape, T., Hobern, D., Garnett, S., Little, H., DeWalt, R. E., Ma, K., Miller, J., Orrell, T., Aalbu, R., Abbott, J., et al. (2024). Catalogue of Life (Version 2024-09-25). Catalogue of Life, Amsterdam, Netherlands. https://doi.org/10.48580/dgh3g Paulson, D., Schorr, M., Abbott, J., Bota-Sierra, C., Deliry, C., Dijkstra, K.-D., & Lozano, F. (2024). The World Odonata List (version 2024-09-06). In O. Bánki, Y. Roskov, M. Döring, G. Ower, D. R. Hernández Robles, C. A. Plata Corredor, T. Stjernegaard Jeppesen, A. Örn, L. Vandepitte, T. Pape, D. Hobern, S. Garnett, H. Little, R. E. DeWalt, K. Ma, J. Miller, T. Orrell, R. Aalbu, J. Abbott, et al., Catalogue of Life (Version 2024-09-25). Catalogue of Life, Amsterdam, Netherlands. https://doi.org/10.48580/dgh3g-75rv
Species Groups
Macrozoobenthos
Study site
_global
Contact
Vanessa Bremerich
Licence for data
All rights reserved. Please send a request to Vanessa Bremerich if you like to use this data. Mind our data policy: IGB Data Policy
Project
ODER~SO - Incident-related special investigation programme for the environmental disaster in the Oder River of August 2022 Project Website

Data files (e.g. excel)

TitlecreatedFiletypeActions
odonata_checklist_v1.csv 11. Oct. 2024 15:07 datatable: .csv Download

Machine Readable Metadata Files

FRED provides all metadata of this package in a maschine readable format. There is a pure XML file and one EML file in Ecological Metadata Language. Both files are published under the free CC BY 4.0 Licence.

  • FIPbio_Odonata_Checklist.xml
  • FIPbio_Odonata_Checklist.eml

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Parsing data File

Estimated Time:

Why does it take so much time?

While parsing a file, the database has to perform various tasks, some of them needs a lot of CPU and memory for larger files.

  • preprocessing: means automatic detection of headlines, table body, format values or csv-separators
  • copying: means read the file cell by cell and copy all elements to the database. During this format settings can be calculated (for example iso-time)
  • analyzing: check out for different data types (can be time, numeric or text)