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761 Lake Burgsee manuscript "Dynamics of greenhouse gases (CH4 and CO2) in meromictic Lake Burgsee, Germany" data

DOI Info:

  • DOI: 10.18728/igb-fred-761.0
  • How to cite: Andrea Fuchs https://orcid.org/0000-0002-7204-6142 (2022-07-28 ) Lake Burgsee manuscript "Dynamics of greenhouse gases (CH4 and CO2) in meromictic Lake Burgsee, Germany" data. IGB Leibniz-Institute of Freshwater Ecology and Inland Fisheries. dataset. https://doi.org/10.18728/igb-fred-761.0

    • DOI history

    Date DOI PackageId Note
    2022-07-2810.18728/igb-fred-761.0761this package latest

Title
Lake Burgsee manuscript "Dynamics of greenhouse gases (CH4 and CO2) in meromictic Lake Burgsee, Germany" data
Period
2017-09-29 till 2018-09-25
Period length
11 months 26 days
Sampling interval
1 year Irregular Interval
Description
Data from sampling campaigns in Lake Burgsee in 2017 and 2018. Data on water chemistry (temperature, oxygen, pH, conductivity, turbidity, chlorophyll a, phycocyanine), water nutrients (nitrate, ammonium, soluble reactive phosphate, total phosphate, chloride), greenhouse gas concentrations in the water column (methane and carbon dioxide), methane production potentials in the sediment, sediment nutrients (sodium, ammonium, potassium, magnesium, fluoride, chloride, bromide, nitrate, sulfate), sediment characteristics (wet weight, dry weight, organic matter, organic carbon, nonC-minerals, porosity)
Species Groups
Study site
Lake Burgsee
Sampling locations
Lake Burgsee sinkhole
location
50.81162896680605, 10.235974788665773
location
type
state
code
description
Parameters

physics:

turbidity
name
turbidity
synonyms
Trübung
water temperature
name
water temperature
description

determination by temperature-probe

synonyms
water temp, Wassertemperatur

chemistry:

carbon dioxide
name
carbon dioxide
Cl, chloride
name
Cl, chloride
description

0,2µm filtrated, Ionenchromatographie (IC)

synonyms
Chlorid
dry mass
name
dry mass
description

balance after drying

synonyms
Trockenmasse
electrical conductivity
name
electrical conductivity
description

determination by conductivity-probe

synonyms
elektrische Leitfähigkeit, Salinität, Salzgehalt, Konduktivität, cond
F, fluoride
name
F, fluoride
K, potassium
name
K, potassium
description
0,45µm filtrated, inductively coupled plasma optical emission spectrometry (ICP-OES)
synonyms
Kalium
methan
name
methan
Mg, magnesium
name
Mg, magnesium
description

0,45µm filtrated, inductively coupled plasma optical emission spectrometry (ICP-OES)

synonyms
Magnesium
N, ammonia-nitrogen
name
N, ammonia-nitrogen
description

0,45µm filtrated, photometric determination

synonyms
NH4+-N, Ammonium, ammonia, NH4-N, NH4
N, nitrate-nitrogen
name
N, nitrate-nitrogen
description

0,45µm filtrated, photometric determination

synonyms
NO3-N, NO3--N, nitrate, Nitrat
O, oxygen concentration
name
O, oxygen concentration
description

determination by oxygen-probe

synonyms
Sauerstoffkonzentration
O, oxygen saturation
name
O, oxygen saturation
description

determination by oxygen-probe

synonyms
Sauerstoffsättigung
pH
name
pH
description

pH-probe determination
P, (soluble reactive phosphorus)
name
P, (soluble reactive phosphorus)
description

0,45µm filtrated, photometric determination

synonyms
anorganischer gelöster Phosphor, ortho-Phosphat-P, DRP, DIP, inorganic soluble phosphorus, phosphate-phosphorus
P, (total phosphorus)
name
P, (total phosphorus)
description

photometric determination after digestion

synonyms
total phosphorus, gesamter Phosphor
S, sulfate
name
S, sulfate
description

0,2µm filtrated, Ionenchromatographie (IC)

synonyms
sulphate, Sulfat

biology:

chlorophyll a
name
chlorophyll a
description

Attention: There are two different methods:

HPLC - High Performance Liquid Chromatography (ex situ)

YSI - Chlorophyll Sensor in Multiparameter probe (in situ)

synonyms
Chlorophyllkonzentration, alpha-chlorophyll
phycocyanin
name
phycocyanin
description

A measurement of Blue algae concentration.

Unit RFU: relative fluorescence units.
Contact
Andrea Fuchs, Jörg Lewandowski, Peter Casper
Licence for data
This data are made available under the Open Database License:Open Data Commons Attribution License
Publications

List of all publications related to this package:

  • Fuchs, A., Casper, P., Lewandowski, J. (2022). Dynamics of greenhouse gases (CH4 and CO2) in meromictic Lake Burgsee, Germany. Journal of Geophysical Research - Biogeosciences

Data files (e.g. excel)

TitlecreatedFiletypeActions
Burgsee_sediment_characteristics.xlsx 28. Jul. 2022 13:01 datatable: .xlsx
Error: To access file, please get in touch with the contact person.
Burgsee_nutrients_water.xlsx 28. Jul. 2022 13:01 datatable: .xlsx
Error: To access file, please get in touch with the contact person.
Burgsee_nutrients_sediment.xlsx 28. Jul. 2022 13:01 datatable: .xlsx
Error: To access file, please get in touch with the contact person.
Burgsee_methane_production_sediment.xlsx 28. Jul. 2022 13:01 datatable: .xlsx
Error: To access file, please get in touch with the contact person.
Burgsee_GHGwater_MICOS.xlsx 28. Jul. 2022 12:59 datatable: .xlsx
Error: To access file, please get in touch with the contact person.
Burgsee_GHGwater.xlsx 28. Jul. 2022 12:58 datatable: .xlsx
Error: To access file, please get in touch with the contact person.
Burgsee_Chemie.xlsx 28. Jul. 2022 12:51 datatable: .xlsx
Error: To access file, please get in touch with the contact person.

Machine Readable Metadata Files

FRED provides all metadata of this package in a maschine readable format. There is a pure XML file and one EML file in Ecological Metadata Language. Both files are published under the freeODC-ByLicence.

  • Lake_Burgsee_manuscript_"Dynamics_of_greenhouse_gases_(CH4_and_CO2)_in_meromictic_Lake_Burgsee,_Germany"_data.xml
  • Lake_Burgsee_manuscript_"Dynamics_of_greenhouse_gases_(CH4_and_CO2)_in_meromictic_Lake_Burgsee,_Germany"_data.eml

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Parsing data File

Estimated Time:

Why does it take so much time?

While parsing a file, the database has to perform various tasks, some of them needs a lot of CPU and memory for larger files.

  • preprocessing: means automatic detection of headlines, table body, format values or csv-separators
  • copying: means read the file cell by cell and copy all elements to the database. During this format settings can be calculated (for example iso-time)
  • analyzing: check out for different data types (can be time, numeric or text)